PyOpenWorm
  • PyOpenWorm API
    • Basic Classes
      • Worm
      • Network
      • Connection
      • Cell
      • Neuron
      • Muscle
      • Channel
      • Evidence
  • For Users
    • Requirements for data storage in OpenWorm
      • Interface
      • Data modelling
        • Nervous system
        • Development
        • Aging
      • Information assurance
        • Reasoning and Data integrity
        • Input validation
        • Provenance
        • Access control
      • Miscellaneous
        • Versioning
      • Why RDF?
        • FuXi
    • Adding Data to YOUR OpenWorm Database
    • Making data objects
    • Sharing Data with other users
  • For Developers
    • Adding documentation
      • API Documentation
      • Substitutions
      • Conventions
    • RDF semantics for PyOpenWorm
    • RDF structure for PyOpenWorm
    • Population()
      • Population.filterCells(filters : ListOf(PairOf(unboundMethod, methodArgument))) : Population
    • NeuroML()
      • NeuroML.generate(object : {Network, Neuron, IonChannel}, type : {0,1,2}) : neuroml.NeuroMLDocument
      • NeuroML.write(document : neuroml.NeuroMLDocument, filename : String)
 
PyOpenWorm
  • Docs »
  • Welcome to PyOpenWorm’s documentation!
  • Edit on GitHub

Welcome to PyOpenWorm’s documentation!¶

Our main README is available online on Github. [1] This documentation contains additional materials beyond what is covered there.

[1]http://github.com/openworm/PyOpenWorm

Contents:

  • PyOpenWorm API
    • Basic Classes
  • For Users
    • Requirements for data storage in OpenWorm
    • Adding Data to YOUR OpenWorm Database
    • Making data objects
    • Sharing Data with other users
  • For Developers
    • Adding documentation
    • RDF semantics for PyOpenWorm
    • RDF structure for PyOpenWorm
    • Population()
    • NeuroML()

Issues¶

Indices and tables¶

  • Index
  • Module Index
  • Search Page
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